Brainprep Alternatives

Preprocessing pipeline on Brain MR Images through FSL and ANTs, including registration, skull-stripping, bias field correction, enhancement and segmentation.
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Alternatives To quqixun/BrainPrep
Project Name Stars Downloads Repos Using This Packages Using This Most Recent Commit Total Releases Latest Release Open Issues License Language
zhulf0804/3D-PointCloud 1,940 0 0 over 2 years ago 0 3 Python
Papers and Datasets about Point Cloud.
xinario/awesome-gan-for-medical-imaging 1,919 0 0 almost 4 years ago 0 2
Awesome GAN for Medical Imaging
Slicer/Slicer 1,339 0 0 about 2 years ago 0 578 other C++
Multi-platform, free open source software for visualization and image computing.
InsightSoftwareConsortium/ITK 1,306 0 5 about 2 years ago 4 February 01, 2022 318 apache-2.0 C++
Insight Toolkit (ITK) -- Official Repository. ITK builds on a proven, spatially-oriented architecture for processing, segmentation, and registration of scientific images in two, three, or more dimensions.
ANTsX/ANTs 1,074 0 0 about 2 years ago 0 97 apache-2.0 C++
Advanced Normalization Tools (ANTs)
kzampog/cilantro 892 0 0 over 2 years ago 0 19 mit C++
A lean C++ library for working with point cloud data
Slicer/SlicerGitSVNArchive 883 0 0 about 6 years ago 0 25 other C++
Multi-platform, free open source software for visualization and image computing.
SimpleITK/SimpleITK 801 216 281 about 2 years ago 34 November 06, 2023 44 apache-2.0 SWIG
SimpleITK: a layer built on top of the Insight Toolkit (ITK), intended to simplify and facilitate ITK's use in rapid prototyping, education and interpreted languages.
dipy/dipy 647 0 0 about 2 years ago 0 155 other Python
DIPY is the paragon 3D/4D+ imaging library in Python. Contains generic methods for spatial normalization, signal processing, machine learning, statistical analysis and visualization of medical images. Additionally, it contains specialized methods for computational anatomy including diffusion, perfusion and structural imaging.
uncbiag/easyreg 130 0 0 over 3 years ago 0 6 other Python
an image registration/augmentation/segmentation package
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