Dotplot Alternatives

Simple visualisation tool for sequences' similarity in bioinformatics
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Alternatives To kn-bibs/dotplot
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pymodproject/pymod 61 0 0 over 2 years ago 0 0 lgpl-2.1 Python
PyMod 3 - sequence similarity searches, multiple sequence/structure alignments, and homology modeling within PyMOL.
related-sciences/nxontology 59 0 2 almost 3 years ago 15 February 28, 2023 3 apache-2.0 Python
NetworkX-based Python library for representing ontologies
bio-ontology-research-group/ontology-tutorial 59 0 0 over 3 years ago 0 12 cc-by-4.0 Jupyter Notebook
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FangpingWan/NeoDTI 54 0 0 almost 5 years ago 0 0 apache-2.0 Python
NeoDTI: Neural integration of neighbor information from a heterogeneous network for discovering new drug-target interactions
YuLab-SMU/GOSemSim 52 0 0 about 2 years ago 0 13 R
:golf: GO-terms Semantic Similarity Measures
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Natural language processing of Gene Expression Omnibus data
nanxstats/Rcpi 28 0 0 almost 3 years ago 0 4 artistic-2.0 R
Molecular informatics toolkit with a comprehensive integration of bioinformatics and cheminformatics tools for drug discovery.
barupal/ChemRICH 19 0 0 over 3 years ago 0 1 R
Chemical Similarity Enrichment analysis of metabolomics datasets
llrs/BioCor 14 0 0 over 2 years ago 0 6 other R
Package to calculate functional similarity between genes https://biocor.llrs.dev
benedekrozemberczki/OrbitalFeatures 13 0 0 over 3 years ago 0 0 gpl-3.0 Python
A sparsity aware implementation of "Biological Network Comparison Using Graphlet Degree Distribution" (Bioinformatics 2007)
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