| OpenGene/fastp |
1,602 |
|
0 |
0 |
over 2 years ago |
1 |
December 15, 2021 |
309 |
mit |
C++ |
| An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...) |
| FelixKrueger/TrimGalore |
382 |
|
0 |
0 |
almost 3 years ago |
2 |
December 29, 2020 |
9 |
gpl-3.0 |
Perl |
| A wrapper around Cutadapt and FastQC to consistently apply adapter and quality trimming to FastQ files, with extra functionality for RRBS data |
| pinellolab/CRISPResso2 |
233 |
|
0 |
0 |
about 2 years ago |
0 |
|
24 |
other |
Python |
| Analysis of deep sequencing data for rapid and intuitive interpretation of genome editing experiments |
| jdidion/atropos |
116 |
|
0 |
0 |
over 2 years ago |
0 |
|
25 |
other |
Python |
| An NGS read trimming tool that is specific, sensitive, and speedy. (production) |
| jstjohn/SeqPrep |
109 |
|
0 |
0 |
over 9 years ago |
0 |
|
24 |
mit |
C |
| Tool for stripping adaptors and/or merging paired reads with overlap into single reads. |
| MikkelSchubert/adapterremoval |
87 |
|
0 |
0 |
almost 3 years ago |
0 |
|
9 |
gpl-3.0 |
C++ |
| AdapterRemoval v2 - rapid adapter trimming, identification, and read merging |
| vsbuffalo/scythe |
79 |
|
0 |
0 |
about 8 years ago |
0 |
|
15 |
mit |
C |
| A 3'-end adapter contaminant trimmer |
| relipmoc/skewer |
70 |
|
0 |
0 |
almost 10 years ago |
0 |
|
34 |
mit |
C++ |
| sequencing/NxTrim |
50 |
|
0 |
0 |
almost 8 years ago |
0 |
|
3 |
other |
C++ |
| Adapter trimming and virtual library creation for Illumina Nextera Mate Pair libraries. |
| hellosunking/Ktrim |
30 |
|
0 |
0 |
over 2 years ago |
0 |
|
5 |
|
C++ |
| Ktrim: an extra-fast and accurate adapter- and quality-trimmer for sequencing data |
