| OpenGene/fastp |
1,602 |
|
0 |
0 |
over 2 years ago |
1 |
December 15, 2021 |
309 |
mit |
C++ |
| An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...) |
| marcelm/cutadapt |
475 |
|
64 |
24 |
about 2 years ago |
64 |
December 06, 2023 |
59 |
mit |
Python |
| Cutadapt removes adapter sequences from sequencing reads |
| pinellolab/CRISPResso2 |
233 |
|
0 |
0 |
about 2 years ago |
0 |
|
24 |
other |
Python |
| Analysis of deep sequencing data for rapid and intuitive interpretation of genome editing experiments |
| relipmoc/skewer |
70 |
|
0 |
0 |
almost 10 years ago |
0 |
|
34 |
mit |
C++ |
| seqan/flexbar |
59 |
|
0 |
0 |
over 6 years ago |
0 |
|
5 |
bsd-3-clause |
C++ |
| flexible barcode and adapter removal |
| hyeshik/poreplex |
51 |
|
0 |
0 |
almost 6 years ago |
7 |
October 18, 2019 |
11 |
other |
Python |
| A versatile sequenced read processor for nanopore direct RNA sequencing |
| mikessh/migec |
40 |
|
0 |
0 |
almost 3 years ago |
0 |
|
28 |
other |
Groovy |
| A RepSeq processing swiss-knife |
| hellosunking/Ktrim |
30 |
|
0 |
0 |
over 2 years ago |
0 |
|
5 |
|
C++ |
| Ktrim: an extra-fast and accurate adapter- and quality-trimmer for sequencing data |
| jhhung/PEAT |
20 |
|
0 |
0 |
about 5 years ago |
0 |
|
5 |
gpl-2.0 |
C++ |
| An ultra fast and accurate paired-end adapter trimmer that needs no a priori adapter sequences. |
| lpantano/seqbuster |
10 |
|
0 |
0 |
almost 7 years ago |
0 |
|
8 |
|
Java |
| pipeline for the analysis of small RNA data |
