| nextflow-io/nextflow |
2,447 |
|
0 |
16 |
about 2 years ago |
250 |
November 24, 2023 |
336 |
apache-2.0 |
Groovy |
| A DSL for data-driven computational pipelines |
| galaxyproject/galaxy |
1,211 |
|
2 |
23 |
about 2 years ago |
30 |
December 08, 2023 |
2,169 |
other |
Python |
| Data intensive science for everyone. |
| scipipe/scipipe |
1,010 |
|
0 |
0 |
over 2 years ago |
47 |
October 14, 2021 |
51 |
mit |
Go |
| Robust, flexible and resource-efficient pipelines using Go and the commandline |
| shenwei356/rush |
782 |
|
0 |
0 |
over 2 years ago |
32 |
November 13, 2023 |
7 |
mit |
Go |
| A cross-platform command-line tool for executing jobs in parallel |
| aidenlab/juicer |
313 |
|
0 |
0 |
about 3 years ago |
0 |
|
40 |
mit |
Shell |
| A One-Click System for Analyzing Loop-Resolution Hi-C Experiments |
| nf-core/sarek |
299 |
|
0 |
0 |
about 2 years ago |
0 |
|
180 |
mit |
Nextflow |
| Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing |
| bedops/bedops |
244 |
|
0 |
0 |
almost 4 years ago |
1 |
March 03, 2021 |
17 |
other |
C |
| :microscope: BEDOPS: high-performance genomic feature operations |
| ssadedin/bpipe |
220 |
|
0 |
0 |
over 2 years ago |
0 |
|
155 |
other |
Groovy |
| Bpipe - a tool for running and managing bioinformatics pipelines |
| nf-core/tools |
205 |
|
0 |
2 |
about 2 years ago |
42 |
December 20, 2023 |
221 |
mit |
Python |
| Python package with helper tools for the nf-core community. |
| ugeneunipro/ugene |
190 |
|
0 |
0 |
about 2 years ago |
0 |
|
6 |
gpl-2.0 |
C++ |
| UGENE is free open-source cross-platform bioinformatics software |
