| hci-unihd/plant-seg |
81 |
|
0 |
0 |
about 2 years ago |
0 |
|
22 |
mit |
Python |
| A tool for cell instance aware segmentation in densely packed 3D volumetric images |
| gao-lab/Cell_BLAST |
74 |
|
0 |
0 |
over 2 years ago |
8 |
February 08, 2023 |
5 |
mit |
Python |
| A BLAST-like toolkit for large-scale scRNA-seq data querying and annotation. |
| scverse/rapids_singlecell |
66 |
|
0 |
0 |
about 2 years ago |
19 |
November 14, 2023 |
8 |
mit |
Jupyter Notebook |
| Rapids_singlecell: A GPU-accelerated tool for scRNA analysis. Offers seamless scverse compatibility for efficient single-cell data processing and analysis. |
| RWilton/Arioc |
54 |
|
0 |
0 |
over 2 years ago |
0 |
|
0 |
bsd-3-clause |
|
| Arioc: GPU-accelerated DNA short-read alignment |
| OpenHero/gblastn |
52 |
|
0 |
0 |
over 3 years ago |
0 |
|
2 |
mit |
C++ |
| G-BLASTN is a GPU-accelerated nucleotide alignment tool based on the widely used NCBI-BLAST. |
| KevinMenden/scaden |
40 |
|
0 |
0 |
almost 5 years ago |
13 |
June 10, 2021 |
11 |
mit |
Python |
| Deep Learning based cell composition analysis with Scaden. |
| akiyamalab/MEGADOCK |
38 |
|
0 |
0 |
over 2 years ago |
0 |
|
2 |
other |
C++ |
| An ultra-high-performance protein-protein docking for heterogeneous supercomputers |
| aquaskyline/SOAP3-dp |
24 |
|
0 |
0 |
about 5 years ago |
0 |
|
0 |
|
C |
| To tackle the exponentially increasing throughput of Next-Generation Sequencing (NGS), most of the existing short-read aligners can be configured to favor speed in trade of accuracy and sensitivity. SOAP3-dp, through leveraging the computational power of both CPU and GPU with optimized algorithms, delivers high speed and sensitivity simultaneously. |
| quim0/WFA-GPU |
24 |
|
0 |
0 |
over 2 years ago |
0 |
|
0 |
mit |
C |
| GPU implementation of the Wavefront Alignment Algorithm for global, gap-affine, pairwise sequence alginment |
| zhengxwen/HIBAG |
23 |
|
0 |
0 |
about 2 years ago |
0 |
|
13 |
|
C++ |
| R package – HLA Genotype Imputation with Attribute Bagging (development version only) |
