Mummer2circos Alternatives

Circular bacterial genome plots based on BLAST or NUCMER/PROMER alignments
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Alternatives To metagenlab/mummer2circos
Project Name Stars Downloads Repos Using This Packages Using This Most Recent Commit Total Releases Latest Release Open Issues License Language
deeptools/pyGenomeTracks 654 0 0 almost 3 years ago 0 33 gpl-3.0 Python
python module to plot beautiful and highly customizable genome browser tracks
ryanlayer/samplot 458 0 0 over 2 years ago 3 October 11, 2020 42 mit Python
Plot structural variant signals from many BAMs and CRAMs
bernatgel/karyoploteR 278 0 0 over 2 years ago 0 51 R
karyoploteR - An R/Bioconductor package to plot arbitrary data along the genome
Ecogenomics/CheckM 235 0 0 over 3 years ago 0 9 gpl-3.0 Python
Assess the quality of microbial genomes recovered from isolates, single cells, and metagenomes
marbl/merqury 234 0 0 over 2 years ago 0 16 other Shell
k-mer based assembly evaluation
menghaowei/ngs_learning 131 0 0 over 6 years ago 0 0
生物信息学交流资料
genotoul-bioinfo/dgenies 85 0 0 over 2 years ago 0 62 gpl-3.0 JavaScript
Dotplot large Genomes in an Interactive, Efficient and Simple way
metagenlab/mummer2circos 79 0 0 over 2 years ago 0 7 mit Python
Circular bacterial genome plots based on BLAST or NUCMER/PROMER alignments
JustinChu/JupiterPlot 54 0 0 over 3 years ago 0 11 gpl-3.0 Perl
A Circos-based tool to visualize genome assembly consistency
conchoecia/pauvre 43 2 2 over 3 years ago 27 May 04, 2021 3 C
Pauvre: QC and genome browser plotting Oxford Nanopore and PacBio long reads.
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