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The Top 10 Sequence Alignment Open Source Projects
Open source projects categorized as Sequence Alignment
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Sequence Alignment
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biopython/biopython
⭐
3,918
Official git repository for Biopython (originally converted from CVS)
dependent packages
0
total releases
0
most recent commit
about 2 years ago
lh3/minimap2
⭐
1,613
A versatile pairwise aligner for genomic and spliced nucleotide sequences
dependent packages
0
total releases
0
most recent commit
about 2 years ago
lh3/bwa
⭐
1,282
Burrow-Wheeler Aligner for short-read alignment (see minimap2 for long-read alignment)
dependent packages
0
total releases
0
most recent commit
almost 3 years ago
bbuchfink/diamond
⭐
900
Accelerated BLAST compatible local sequence aligner.
dependent packages
0
total releases
0
most recent commit
over 2 years ago
tanghaibao/jcvi
⭐
650
Python library to facilitate genome assembly, annotation, and comparative genomics
dependent packages
0
total releases
0
most recent commit
over 2 years ago
bwa-mem2/bwa-mem2
⭐
645
The next version of bwa-mem
dependent packages
0
total releases
0
most recent commit
over 2 years ago
torognes/vsearch
⭐
605
Versatile open-source tool for microbiome analysis
dependent packages
0
total releases
0
most recent commit
about 2 years ago
biojava/biojava
⭐
564
:book::microscope::coffee: BioJava is an open-source project dedicated to providing a Java library for processing biological data.
dependent packages
0
total releases
0
most recent commit
about 2 years ago
seqan/seqan
⭐
444
SeqAn's official repository.
dependent packages
0
total releases
0
most recent commit
about 2 years ago
Martinsos/edlib
⭐
421
Lightweight, super fast C/C++ (& Python) library for sequence alignment using edit (Levenshtein) distance.
dependent packages
0
total releases
0
most recent commit
almost 3 years ago
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