Diamond Alternatives

Accelerated BLAST compatible local sequence aligner.
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Alternatives To bbuchfink/diamond
Project Name Stars Downloads Repos Using This Packages Using This Most Recent Commit Total Releases Latest Release Open Issues License Language
biopython/biopython 3,918 1,465 1,373 about 2 years ago 58 February 13, 2023 545 other Python
Official git repository for Biopython (originally converted from CVS)
bbuchfink/diamond 900 0 0 over 2 years ago 0 173 gpl-3.0 C++
Accelerated BLAST compatible local sequence aligner.
biologyguy/BuddySuite 105 0 0 over 4 years ago 18 December 06, 2021 12 other Python
Bioinformatics toolkits for manipulating sequence, alignment, and phylogenetic tree files
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Arioc: GPU-accelerated DNA short-read alignment
ruanjue/bsalign 27 0 0 almost 3 years ago 0 0 gpl-3.0 C
Banded Striped DNA Sequence Alignment
ropensci/phylotaR 24 0 0 almost 3 years ago 1 July 31, 2018 8 other R
An automated pipeline for retrieving orthologous DNA sequences from GenBank in R
wafflespeanut/nucleic-acid 15 0 0 over 8 years ago 2 May 31, 2017 0 mit Rust
BWT, FM-index and bits vector for analyzing DNA sequence data.
s-andrews/redotable 10 0 0 over 3 years ago 0 4 gpl-3.0 Java
A dotplot application for DNA/RNA sequence
samitha9125/LocalSequnceAlignment 7 0 0 about 8 years ago 0 0
This is a Java Program which will provide the local sequence alignment of two DNA
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