| vgteam/vg |
1,022 |
|
0 |
0 |
about 2 years ago |
0 |
|
760 |
other |
C++ |
| tools for working with genome variation graphs |
| chhylp123/hifiasm |
443 |
|
0 |
0 |
about 2 years ago |
0 |
|
324 |
mit |
C++ |
| Hifiasm: a haplotype-resolved assembler for accurate Hifi reads |
| lh3/minigraph |
367 |
|
0 |
0 |
over 2 years ago |
1 |
June 21, 2023 |
44 |
mit |
C |
| Proof-of-concept seq-to-graph mapper and graph generator |
| neuhausi/canvasXpress |
282 |
|
0 |
4 |
about 2 years ago |
43 |
November 08, 2023 |
7 |
|
R |
| CanvasXpress: A JavaScript Library for Data Analytics with Full Audit Trail Capabilities. |
| lh3/gfatools |
181 |
|
0 |
0 |
over 2 years ago |
0 |
|
17 |
|
C |
| Tools for manipulating sequence graphs in the GFA and rGFA formats |
| lh3/fermi-lite |
67 |
|
0 |
0 |
over 3 years ago |
0 |
|
12 |
mit |
C |
| Standalone C library for assembling Illumina short reads in small regions |
| GATB/gatb-core |
61 |
|
0 |
0 |
over 2 years ago |
0 |
|
12 |
|
C++ |
| Core library of the Genome Analysis Toolbox with de-Bruijn graph |
| isovic/raptor |
50 |
|
0 |
0 |
over 5 years ago |
0 |
|
0 |
bsd-3-clause-clear |
Perl |
| Graph-based mapping of long sequences, noisy or HiFi. |
| medvedevgroup/TwoPaCo |
39 |
|
0 |
0 |
over 3 years ago |
0 |
|
9 |
other |
C++ |
| A fast constructor of the compressed de Bruijn graph from many genomes |
| vgteam/libbdsg |
29 |
|
0 |
0 |
over 2 years ago |
3 |
October 02, 2020 |
30 |
mit |
C++ |
| Optimized sequence graph implementations for graph genomics |
