| a-r-j/graphein |
932 |
|
0 |
1 |
over 2 years ago |
29 |
October 27, 2023 |
41 |
mit |
Jupyter Notebook |
| Protein Graph Library |
| awslabs/dgl-lifesci |
558 |
|
0 |
4 |
almost 3 years ago |
17 |
December 21, 2022 |
25 |
apache-2.0 |
Python |
| Python package for graph neural networks in chemistry and biology |
| ysig/GraKeL |
540 |
|
0 |
1 |
over 2 years ago |
5 |
September 09, 2019 |
8 |
other |
Python |
| A scikit-learn compatible library for graph kernels |
| chhylp123/hifiasm |
443 |
|
0 |
0 |
about 2 years ago |
0 |
|
324 |
mit |
C++ |
| Hifiasm: a haplotype-resolved assembler for accurate Hifi reads |
| plotly/react-cytoscapejs |
407 |
|
10 |
34 |
almost 3 years ago |
7 |
September 02, 2022 |
38 |
mit |
JavaScript |
| React component for Cytoscape.js network visualisations |
| lh3/minigraph |
367 |
|
0 |
0 |
over 2 years ago |
1 |
June 21, 2023 |
44 |
mit |
C |
| Proof-of-concept seq-to-graph mapper and graph generator |
| neuhausi/canvasXpress |
282 |
|
0 |
4 |
about 2 years ago |
43 |
November 08, 2023 |
7 |
|
R |
| CanvasXpress: A JavaScript Library for Data Analytics with Full Audit Trail Capabilities. |
| labgem/PPanGGOLiN |
191 |
|
0 |
0 |
about 2 years ago |
6 |
July 15, 2018 |
9 |
other |
Python |
| Build a partitioned pangenome graph from microbial genomes |
| lh3/gfatools |
181 |
|
0 |
0 |
over 2 years ago |
0 |
|
17 |
|
C |
| Tools for manipulating sequence graphs in the GFA and rGFA formats |
| DecodeGenetics/graphtyper |
156 |
|
0 |
0 |
over 2 years ago |
0 |
|
51 |
mit |
C++ |
| Population-scale genotyping using pangenome graphs |
