| mdozmorov/HiC_tools |
454 |
|
0 |
0 |
over 2 years ago |
0 |
|
1 |
mit |
|
| A collection of tools for Hi-C data analysis |
| nf-core/sarek |
299 |
|
0 |
0 |
about 2 years ago |
0 |
|
180 |
mit |
Nextflow |
| Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing |
| oushujun/EDTA |
294 |
|
0 |
0 |
about 2 years ago |
0 |
|
35 |
gpl-3.0 |
Perl |
| Extensive de-novo TE Annotator |
| ENCODE-DCC/atac-seq-pipeline |
290 |
|
0 |
0 |
about 3 years ago |
0 |
|
51 |
mit |
Python |
| ENCODE ATAC-seq pipeline |
| bactopia/bactopia |
281 |
|
0 |
0 |
over 2 years ago |
0 |
|
67 |
mit |
Nextflow |
| A flexible pipeline for complete analysis of bacterial genomes |
| ncbi/pgap |
263 |
|
0 |
0 |
about 2 years ago |
0 |
|
15 |
other |
Common Workflow Language |
| NCBI Prokaryotic Genome Annotation Pipeline |
| nextgenusfs/funannotate |
261 |
|
0 |
0 |
over 2 years ago |
13 |
August 10, 2022 |
204 |
bsd-2-clause |
Python |
| Eukaryotic Genome Annotation Pipeline |
| kishwarshafin/pepper |
216 |
|
0 |
0 |
over 2 years ago |
8 |
November 19, 2020 |
18 |
mit |
Python |
| PEPPER-Margin-DeepVariant |
| ENCODE-DCC/chip-seq-pipeline2 |
188 |
|
0 |
0 |
over 3 years ago |
0 |
|
35 |
mit |
Python |
| ENCODE ChIP-seq pipeline |
| VGP/vgp-assembly |
160 |
|
0 |
0 |
over 3 years ago |
0 |
|
1 |
other |
Shell |
| VGP repository for the genome assembly working group |
