Pycoqc Alternatives

pycoQC computes metrics and generates Interactive QC plots from the sequencing summary report generated by Oxford Nanopore technologies basecaller (Albacore/Guppy)
Categories  > Science  > Plot
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Alternatives To a-slide/pycoQC
Project Name Stars Downloads Repos Using This Packages Using This Most Recent Commit Total Releases Latest Release Open Issues License Language
wdecoster/NanoPlot 336 4 2 over 2 years ago 151 October 29, 2023 11 mit Python
Plotting scripts for long read sequencing data
a-slide/pycoQC 213 0 0 over 2 years ago 50 December 16, 2020 14 gpl-3.0 Python
pycoQC computes metrics and generates Interactive QC plots from the sequencing summary report generated by Oxford Nanopore technologies basecaller (Albacore/Guppy)
roblanf/minion_qc 174 0 0 over 3 years ago 0 10 mit R
Quality control for MinION sequencing data
nf-core/ampliseq 141 0 0 about 2 years ago 0 15 mit Nextflow
Amplicon sequencing analysis workflow using DADA2 and QIIME2
brentp/go-chartjs 42 0 2 over 8 years ago 1 September 01, 2017 2 mit Go
golang library to make https://chartjs.org/ plots (this is vanilla #golang, not gopherjs)
sbslee/dokdo 30 0 0 over 3 years ago 0 4 mit Python
A Python package for microbiome sequencing analysis with QIIME 2
kauralasoo/wiggleplotr 28 0 0 almost 4 years ago 0 7 apache-2.0 R
A small R package to make sequencing read coverage plots in R.
menghaowei/ngstools 23 0 0 over 6 years ago 0 1 mit Python
My own tools code for NGS data analysis (Next Generation Sequencing)
rghu/reconCNV 18 0 0 almost 5 years ago 0 1 gpl-3.0 Python
visualize CNV data from targeted capture based sequencing data
wdecoster/nanoQC 17 0 0 almost 6 years ago 17 June 17, 2020 2 gpl-3.0 Python
Quality control tools for nanopore sequencing data
Alternatives To a-slide/pycoQC
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