| bioinform/somaticseq |
185 |
|
0 |
0 |
over 2 years ago |
1 |
May 04, 2022 |
5 |
bsd-2-clause |
Python |
| An ensemble approach to accurately detect somatic mutations using SomaticSeq |
| googlegenomics/gcp-variant-transforms |
114 |
|
0 |
0 |
about 4 years ago |
0 |
|
110 |
apache-2.0 |
Python |
| GCP Variant Transforms |
| MathOnco/NeoPredPipe |
93 |
|
0 |
0 |
over 2 years ago |
0 |
|
5 |
lgpl-3.0 |
Python |
| Neoantigens prediction pipeline for multi- or single-region vcf files using ANNOVAR and netMHCpan. |
| h3abionet/h3agwas |
89 |
|
0 |
0 |
over 2 years ago |
0 |
|
11 |
other |
Nextflow |
| GWAS Pipeline for H3Africa |
| nanoporetech/pipeline-structural-variation |
87 |
|
0 |
0 |
over 4 years ago |
0 |
|
19 |
other |
Python |
| Pipeline for calling structural variations in whole genomes sequencing Oxford Nanopore data |
| MerrimanLab/selectionTools |
53 |
|
0 |
0 |
over 3 years ago |
0 |
|
16 |
mit |
Python |
| Pipeline to take VCF through to Selection Analysis. |
| stevemussmann/admixturePipeline |
46 |
|
0 |
0 |
over 2 years ago |
0 |
|
0 |
gpl-3.0 |
Python |
| A pipeline that accepts a VCF file to run through Admixture |
| biowdl/germline-DNA |
23 |
|
0 |
0 |
almost 3 years ago |
0 |
|
2 |
mit |
wdl |
| A BioWDL variantcalling pipeline for germline DNA data. Starting with FASTQ files to produce VCF files. Category:Multi-Sample |
| ALLBio/allbiotc2 |
22 |
|
0 |
0 |
over 11 years ago |
0 |
|
8 |
|
Python |
| Benchmark pipeline for Structural Variation analyses, funded by the ALLBio. |
| hall-lab/sv-pipeline |
21 |
|
0 |
0 |
almost 6 years ago |
0 |
|
8 |
|
wdl |
| Pipeline for structural variation detection in cohorts |
