| galaxyproject/galaxy |
1,211 |
|
2 |
23 |
about 2 years ago |
30 |
December 08, 2023 |
2,169 |
other |
Python |
| Data intensive science for everyone. |
| mdozmorov/scRNA-seq_notes |
478 |
|
0 |
0 |
over 2 years ago |
0 |
|
0 |
mit |
R |
| A list of scRNA-seq analysis tools |
| aidenlab/juicer |
313 |
|
0 |
0 |
about 3 years ago |
0 |
|
40 |
mit |
Shell |
| A One-Click System for Analyzing Loop-Resolution Hi-C Experiments |
| nf-core/sarek |
299 |
|
0 |
0 |
about 2 years ago |
0 |
|
180 |
mit |
Nextflow |
| Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing |
| bedops/bedops |
244 |
|
0 |
0 |
almost 4 years ago |
1 |
March 03, 2021 |
17 |
other |
C |
| :microscope: BEDOPS: high-performance genomic feature operations |
| assemblerflow/flowcraft |
236 |
|
0 |
0 |
almost 6 years ago |
18 |
March 02, 2019 |
39 |
gpl-3.0 |
Python |
| FlowCraft: a component-based pipeline composer for omics analysis using Nextflow. :whale::package: |
| aws-samples/aws-batch-genomics |
181 |
|
0 |
0 |
almost 6 years ago |
0 |
|
5 |
apache-2.0 |
Python |
| Software sets up and runs an genome sequencing analysis workflow using AWS Batch and AWS Step Functions. |
| broadinstitute/gatk-sv |
148 |
|
0 |
0 |
about 2 years ago |
0 |
|
101 |
bsd-3-clause |
Python |
| A structural variation pipeline for short-read sequencing |
| epam/cloud-pipeline |
137 |
|
0 |
0 |
about 2 years ago |
0 |
|
840 |
apache-2.0 |
Java |
| Cloud agnostic genomics analysis, scientific computation and storage platform |
| broadinstitute/viral-ngs |
129 |
|
0 |
0 |
about 6 years ago |
0 |
|
60 |
other |
Python |
| Viral genomics analysis pipelines |
