Genomelake Alternatives

Simple and efficient access to genomic data for deep learning models.
Suggest Alternative
Alternatives To kundajelab/genomelake
Project Name Stars Downloads Repos Using This Packages Using This Most Recent Commit Total Releases Latest Release Open Issues License Language
google/deepvariant 2,978 0 0 over 2 years ago 0 8 bsd-3-clause Python
DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.
jerryji1993/DNABERT 471 0 0 over 2 years ago 0 60 apache-2.0 Python
DNABERT: pre-trained Bidirectional Encoder Representations from Transformers model for DNA-language in genome
rajewsky-lab/mirdeep2 120 0 0 over 2 years ago 0 2 gpl-3.0 Perl
Discovering known and novel miRNAs from small RNA sequencing data
PaulPauls/Tensorflow-Neuroevolution 119 0 0 over 2 years ago 5 September 03, 2020 0 apache-2.0 Python
Neuroevolution Framework for Tensorflow 2.x focusing on modularity and high-performance. Preimplements NEAT, DeepNEAT, CoDeepNEAT
liyu95/DeepSimulator 76 0 0 over 5 years ago 0 8 C
The first deep learning based Nanopore simulator which can simulate the process of Nanopore sequencing.
HKU-BAL/Clair 74 0 0 almost 5 years ago 0 4 bsd-3-clause Python
Clair: Exploring the limit of using deep neural network on pileup data for germline variant calling
yukezhu/visual7w-qa-models 63 0 0 over 6 years ago 0 4 mit Lua
Visual7W visual question answering models
he-dhamo/simsg 51 0 0 almost 4 years ago 0 2 apache-2.0 Python
Semantic Image Manipulation using Scene Graphs (CVPR 2020)
google/deepsomatic 45 0 0 over 2 years ago 0 0 bsd-3-clause
DeepSomatic is an analysis pipeline that uses a deep neural network to call somatic variants from tumor-normal sequencing data.
kundajelab/genomelake 37 1 1 over 6 years ago 4 April 14, 2018 4 bsd-3-clause Python
Simple and efficient access to genomic data for deep learning models.
Alternatives To kundajelab/genomelake
Select To Compare


Alternative Project Comparisons
Popular Deep Learning Projects
Popular Genome Projects
Popular Machine Learning Categories
Related Searches
Get A Weekly Email With Trending Projects
No Spam. Unsubscribe easily at any time.
Privacy | About | Terms | Follow Us On Twitter

Downloads, Dependent Repos, Dependent Packages, Total Releases, Latest Releases data powered by Libraries.io.

Copyright 2018-2026 Awesome Open Source.  All rights reserved.