| aquaskyline/Clairvoyante |
142 |
|
0 |
0 |
over 5 years ago |
0 |
|
0 |
bsd-3-clause |
Python |
| Clairvoyante: a multi-task convolutional deep neural network for variant calling in Single Molecule Sequencing |
| mikessh/migec |
40 |
|
0 |
0 |
almost 3 years ago |
0 |
|
28 |
other |
Groovy |
| A RepSeq processing swiss-knife |
| PacificBiosciences/kineticsTools |
16 |
|
0 |
0 |
about 4 years ago |
0 |
|
39 |
|
Python |
| Tools for detecting DNA modifications from single molecule, real-time sequencing data |
| BuysDB/SingleCellMultiOmics |
15 |
|
0 |
0 |
almost 3 years ago |
24 |
September 19, 2022 |
2 |
mit |
Python |
| Tools which deal with multiple single cell measurements |
| CSB5/INC-Seq |
10 |
|
0 |
0 |
over 5 years ago |
0 |
|
1 |
other |
Python |
| INC-Seq: Accurate single molecule reads using nanopore sequencing |
| Cibiv/trumicount |
8 |
|
0 |
0 |
over 4 years ago |
0 |
|
1 |
agpl-3.0 |
TeX |
| Correctly counting molecules using unique molecular identifiers (UMIs) |
| fanglab/SMALR |
7 |
|
0 |
0 |
about 8 years ago |
0 |
|
7 |
other |
Python |
| SMALR: a framework for single-molecule level interrogation of the methylation status of SMRT reads. |
| fanglab/SMRTER |
6 |
|
0 |
0 |
about 7 years ago |
0 |
|
3 |
|
R |
| Single Molecule Real Time sequencing Epigenetic Refinement |
| JohnUrban/fast5tools |
6 |
|
0 |
0 |
over 3 years ago |
0 |
|
2 |
mit |
Python |
| Tools for working with fast5 files (nanopore data). |
| physnano/rRNA_nanoSHAPE |
5 |
|
0 |
0 |
over 4 years ago |
0 |
|
0 |
gpl-3.0 |
Jupyter Notebook |
| Code accompanying "Direct detection of RNA modifications and structure using single molecule nanopore sequencing" |
