| jsh58/Genrich |
158 |
|
0 |
0 |
almost 3 years ago |
0 |
|
9 |
mit |
C |
| Detecting sites of genomic enrichment |
| rrwick/Badread |
124 |
|
0 |
0 |
over 2 years ago |
1 |
July 23, 2025 |
10 |
gpl-3.0 |
Python |
| a long read simulator that can imitate many types of read problems |
| koszullab/instaGRAAL |
33 |
|
1 |
0 |
about 3 years ago |
6 |
March 21, 2019 |
4 |
gpl-3.0 |
Cuda |
| Large genome reassembly based on Hi-C data, continuation of GRAAL |
| quadram-institute-bioscience/socru |
23 |
|
0 |
0 |
over 2 years ago |
0 |
|
3 |
gpl-3.0 |
Python |
| Order and orientation of complete bacterial genomes |
| koszullab/GRAAL |
13 |
|
0 |
0 |
about 6 years ago |
0 |
|
8 |
|
Python |
| (check out instaGRAAL for a faster, updated program!) This program is from Marie-Nelly et al., Nature Communications, 2014 (High-quality genome assembly using chromosomal contact data), also Marie-Nelly et al., 2013, PhD thesis (https://www.theses.fr/2013PA066714) |
| guigolab/chip-nf |
13 |
|
0 |
0 |
over 3 years ago |
0 |
|
0 |
|
Nextflow |
| An automated ChIP-seq pipeline using Nextfow |
| rr1859/R.4Cker |
12 |
|
0 |
0 |
about 6 years ago |
0 |
|
42 |
mit |
R |
| rchereji/plot2DO |
11 |
|
0 |
0 |
about 5 years ago |
0 |
|
1 |
mit |
R |
| A tool to assess the quality and distribution of genomic data |
| r3fang/SnapTools |
11 |
|
0 |
0 |
about 6 years ago |
22 |
September 04, 2019 |
20 |
apache-2.0 |
Python |
| A module for working with snap files in Python |
| delehef/asgart |
10 |
|
0 |
0 |
almost 5 years ago |
0 |
|
0 |
gpl-3.0 |
Rust |
| A genome-scale, fast, and precise segmental duplications mapping tool |
