Transposome Alternatives

A toolkit for annotation of transposable element families from unassembled sequence reads
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Alternatives To sestaton/Transposome
Project Name Stars Downloads Repos Using This Packages Using This Most Recent Commit Total Releases Latest Release Open Issues License Language
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HGTector2: Genome-wide prediction of horizontal gene transfer based on distribution of sequence homology patterns.
arzwa/wgd 74 0 0 over 2 years ago 0 17 gpl-3.0 Python
Python package and CLI for whole-genome duplication related analyses
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Guided synteny alignment between duplicated genomes (within specified quota constraint)
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Algorithm For Gene Order Reconstruction in Ancestors
HajkD/LTRpred 31 0 0 about 4 years ago 0 6 gpl-2.0 R
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sestaton/Transposome 30 0 0 almost 3 years ago 0 5 mit Perl
A toolkit for annotation of transposable element families from unassembled sequence reads
benelot/minemonics 29 0 0 almost 4 years ago 0 88 C++
(Alpha Stage, work in progress) An open-source 3D virtual creature evolution simulator built in OGRE rendering engine in C++ to experiment with emergent gait-periodicity in evolved creatures on unknown terrain.
sestaton/tephra 26 0 0 almost 3 years ago 0 14 mit Perl
A tool for discovering transposable elements and describing patterns of genome evolution
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