| galaxyproject/galaxy |
1,211 |
|
2 |
23 |
about 2 years ago |
30 |
December 08, 2023 |
2,169 |
other |
Python |
| Data intensive science for everyone. |
| ugeneunipro/ugene |
190 |
|
0 |
0 |
about 2 years ago |
0 |
|
6 |
gpl-2.0 |
C++ |
| UGENE is free open-source cross-platform bioinformatics software |
| aidenlab/3d-dna |
176 |
|
0 |
0 |
over 2 years ago |
0 |
|
50 |
mit |
Shell |
| 3D de novo assembly (3D DNA) pipeline |
| snakemake-workflows/dna-seq-gatk-variant-calling |
138 |
|
0 |
0 |
almost 5 years ago |
0 |
|
10 |
mit |
Python |
| This Snakemake pipeline implements the GATK best-practices workflow |
| nf-core/eager |
112 |
|
0 |
0 |
over 2 years ago |
0 |
|
59 |
mit |
Nextflow |
| A fully reproducible and state-of-the-art ancient DNA analysis pipeline |
| kiryha/AnimationDNA |
75 |
|
0 |
0 |
about 6 years ago |
0 |
|
1 |
|
Python |
| Maya > Arnold > Nuke pipeline |
| smithlabcode/methpipe |
63 |
|
0 |
0 |
over 3 years ago |
0 |
|
34 |
|
C++ |
| A pipeline for analyzing DNA methylation data from bisulfite sequencing. |
| nf-core/deepvariant |
38 |
|
0 |
0 |
almost 5 years ago |
0 |
|
|
mit |
Nextflow |
| Google's DeepVariant variant caller as a Nextflow pipeline |
| nf-core/hlatyping |
34 |
|
0 |
0 |
over 3 years ago |
0 |
|
3 |
mit |
Nextflow |
| Precision HLA typing from next-generation sequencing data |
| HajkD/LTRpred |
31 |
|
0 |
0 |
about 4 years ago |
0 |
|
6 |
gpl-2.0 |
R |
| De novo annotation of young retrotransposons |
