| tseemann/prokka |
415 |
|
0 |
0 |
over 5 years ago |
0 |
|
112 |
|
Perl |
| :zap: :aquarius: Rapid prokaryotic genome annotation |
| seandavi/awesome-cancer-variant-databases |
284 |
|
0 |
0 |
over 2 years ago |
0 |
|
1 |
mit |
|
| A community-maintained repository of cancer clinical knowledge bases and databases focused on cancer variants. |
| marbl/merqury |
234 |
|
0 |
0 |
over 2 years ago |
0 |
|
16 |
other |
Shell |
| k-mer based assembly evaluation |
| fbreitwieser/krakenuniq |
201 |
|
0 |
0 |
about 2 years ago |
0 |
|
107 |
gpl-3.0 |
C++ |
| 🐙 KrakenUniq: Metagenomics classifier with unique k-mer counting for more specific results |
| sanger-pathogens/Artemis |
191 |
|
0 |
0 |
about 3 years ago |
0 |
|
25 |
other |
Java |
| Artemis is a free genome viewer and annotation tool that allows visualization of sequence features and the results of analyses within the context of the sequence, and its six-frame translation |
| pirovc/genome_updater |
123 |
|
0 |
0 |
about 2 years ago |
0 |
|
3 |
mit |
Shell |
| Bash script to download/update snapshots of files from NCBI genomes repository (refseq/genbank) with track of changes and without redundancy |
| oschwengers/referenceseeker |
85 |
|
0 |
0 |
over 2 years ago |
12 |
January 14, 2022 |
2 |
gpl-3.0 |
Python |
| Rapid determination of appropriate reference genomes. |
| dnbaker/bonsai |
68 |
|
0 |
0 |
over 2 years ago |
0 |
|
3 |
mit |
C++ |
| Bonsai: Fast, flexible taxonomic analysis and classification |
| nigyta/dfast_core |
67 |
|
0 |
0 |
over 2 years ago |
0 |
|
13 |
|
Python |
| DDBJ Fast Annotation and Submission Tool |
| biocommons/uta |
59 |
|
0 |
0 |
about 2 years ago |
0 |
|
26 |
apache-2.0 |
Python |
| Universal Transcript Archive: comprehensive genome-transcript alignments; multiple transcript sources, versions, and alignment methods; available as a docker image |
