| vgteam/vg |
1,022 |
|
0 |
0 |
about 2 years ago |
0 |
|
760 |
other |
C++ |
| tools for working with genome variation graphs |
| hail-is/hail |
905 |
|
0 |
17 |
about 2 years ago |
146 |
October 30, 2023 |
211 |
mit |
Python |
| Cloud-native genomic dataframes and batch computing |
| jts/nanopolish |
496 |
|
0 |
0 |
over 2 years ago |
0 |
|
60 |
mit |
C++ |
| Signal-level algorithms for MinION data |
| ryanlayer/samplot |
458 |
|
0 |
0 |
over 2 years ago |
3 |
October 11, 2020 |
42 |
mit |
Python |
| Plot structural variant signals from many BAMs and CRAMs |
| vcftools/vcftools |
415 |
|
0 |
0 |
about 3 years ago |
0 |
|
100 |
lgpl-3.0 |
C++ |
| A set of tools written in Perl and C++ for working with VCF files, such as those generated by the 1000 Genomes Project. |
| tseemann/snippy |
408 |
|
0 |
0 |
over 2 years ago |
0 |
|
179 |
gpl-2.0 |
Perl |
| :scissors: :zap: Rapid haploid variant calling and core genome alignment |
| Illumina/hap.py |
283 |
|
0 |
0 |
over 4 years ago |
0 |
|
80 |
other |
C++ |
| Haplotype VCF comparison tools |
| tariqdaouda/pyGeno |
242 |
|
1 |
0 |
almost 6 years ago |
18 |
December 15, 2021 |
5 |
apache-2.0 |
Python |
| Personalized Genomics and Proteomics. Main diet: Ensembl, side dishes: SNPs |
| sigven/pcgr |
234 |
|
0 |
0 |
over 2 years ago |
0 |
|
13 |
mit |
R |
| Personal Cancer Genome Reporter (PCGR) |
| nygenome/lancet |
145 |
|
0 |
0 |
almost 4 years ago |
0 |
|
0 |
other |
C |
| Microassembly based somatic variant caller for NGS data |
